Skip to content

Commit 44813a8

Browse files
author
Ryan
committed
Update README
1 parent d43b1ba commit 44813a8

1 file changed

Lines changed: 4 additions & 2 deletions

File tree

README.md

Lines changed: 4 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -61,7 +61,7 @@ If you are using Nextflow outside of NIH CloudLab you must enable the required A
6161

6262
**Create the Vertex AI Instance**
6363

64-
Follow the steps highlighted [here](https://github.com/STRIDES/NIHCloudLabGCP/blob/main/docs/vertexai.md) to create a new user-managed notebook in Vertex AI. Follow steps 1-8 and be especially careful to enable idle shutdown as highlighted in step 7. For this module you should select Debian 11 and Python3 in the Environment tab in step 5. In step 6 in the Machine type tab, select n1-highmem-16 from the dropdown box. This will provide you with 16 vCPUs and 104 GB of RAM which may feel like a lot but is necessary for TransPi to run.
64+
Follow the steps highlighted [here](https://github.com/STRIDES/NIHCloudLabGCP/blob/main/docs/vertexai.md) to create a new user-managed notebook in Vertex AI. Follow steps 1-8 and be especially careful to enable idle shutdown as highlighted in step 7. For this module you should select **Debian 11** and **Python3** in the Environment tab in step 5. In step 6 in the Machine type tab, select **n1-highmem-16** from the dropdown box. This will provide you with 16 vCPUs and 104 GB of RAM which may feel like a lot but is necessary for TransPi to run.
6565

6666

6767
#### Part 2: Adding the Modules to the Notebook
@@ -111,7 +111,9 @@ Additional datasets for demonstration of the annotation features of TransPi were
111111
- Pseudacris regilla
112112
- Bioproject: [**PRJNA163143**](https://www.ncbi.nlm.nih.gov/bioproject/PRJNA163143)
113113
- Originally generated by **Laura Robertson, USGS**.
114-
-
114+
- Apis mellifera
115+
- Bioproject: [**PRJNA274674**](https://www.ncbi.nlm.nih.gov/bioproject/PRJNA274674)
116+
- Originally generated by **Galbraith DA et al., 2015**.
115117

116118
## **Troubleshooting**
117119
- If a quiz is not rendering:

0 commit comments

Comments
 (0)