Merge pull request #59 from Materials-Data-Science-and-Informatics/58-use-ruff

58 use ruff

Author: mustafasoylu

.pre-commit-config.yaml

@@ -1,92 +1,68 @@
 repos:
-    # Various general + format-specific helpers
-    - repo: https://github.com/pre-commit/pre-commit-hooks
-      rev: v4.4.0
-      hooks:
-          - id: check-symlinks
-          - id: trailing-whitespace
-          - id: mixed-line-ending
-            args: [--fix=lf]
-          - id: check-yaml
-            exclude: 'mkdocs.yml'
-          - id: check-toml
-          - id: check-json
-          - id: check-ast
-          - id: debug-statements
-          - id: check-merge-conflict
-          - id: check-shebang-scripts-are-executable
-          - id: check-added-large-files
-            args: [--maxkb=10000]
-    - repo: https://github.com/python-jsonschema/check-jsonschema
-      rev: '0.22.0'
-      hooks:
-          - id: check-github-workflows
-    - repo: https://github.com/pycqa/isort
-      rev: '5.12.0'
-      hooks:
-          - id: isort
-            args: ['--profile', 'black']
-    - repo: https://github.com/ambv/black
-      rev: '23.1.0'
-      hooks:
-          - id: black
-    - repo: https://github.com/PyCQA/autoflake
-      rev: v2.1.1
-      hooks:
-          - id: autoflake
+  # Various general + format-specific helpers
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.4.0
+    hooks:
+      - id: check-symlinks
+      - id: trailing-whitespace
+      - id: mixed-line-ending
+        args: [--fix=lf]
+      - id: check-yaml
+        exclude: "mkdocs.yml"
+      - id: check-toml
+      - id: check-json
+      - id: check-ast
+      - id: debug-statements
+      - id: check-merge-conflict
+      - id: check-shebang-scripts-are-executable
+      - id: check-added-large-files
+        args: [--maxkb=10000]
+  - repo: https://github.com/python-jsonschema/check-jsonschema
+    rev: "0.22.0"
+    hooks:
+      - id: check-github-workflows
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    # Ruff version.
+    rev: v0.1.6
+    hooks:
+      # Run the linter.
+      - id: ruff
+        types_or: [python, pyi, jupyter]
+        args: [--fix]
+      # Run the formatter.
+      - id: ruff-format
+        types_or: [python, pyi, jupyter]
+  - repo: https://github.com/pre-commit/mirrors-mypy
+    rev: "v1.1.1"
+    hooks:
+      - id: mypy
+        args: [--no-strict-optional, --ignore-missing-imports]
+        # NOTE: you might need to add some deps here:
+        additional_dependencies: []
 
-    # Quality
-    - repo: https://github.com/pycqa/flake8
-      rev: '6.0.0'
-      hooks:
-          - id: flake8
-            additional_dependencies:
-                - Flake8-pyproject==1.2.3
-                - flake8-bugbear==23.3.23
-                - dlint==0.14.1
-    - repo: https://github.com/pycqa/pydocstyle
-      rev: '6.3.0'
-      hooks:
-          - id: pydocstyle
-            additional_dependencies: ['tomli==2.0.1']
-            files: '^src/'
-    - repo: https://github.com/pre-commit/mirrors-mypy
-      rev: 'v1.1.1'
-      hooks:
-          - id: mypy
-            args: [--no-strict-optional, --ignore-missing-imports]
-            # NOTE: you might need to add some deps here:
-            additional_dependencies: []
-    - repo: https://github.com/PyCQA/bandit
-      rev: '1.7.5'
-      hooks:
-          - id: bandit
-            args: ['-q', '-c', 'pyproject.toml']
-            additional_dependencies: ['.[toml]']
+  # Metadata
+  - repo: https://github.com/citation-file-format/cff-converter-python
+    rev: "44e8fc9"
+    hooks:
+      - id: validate-cff
+  - repo: https://github.com/fsfe/reuse-tool
+    rev: "v1.1.2"
+    hooks:
+      - id: reuse
 
-    # Metadata
-    - repo: https://github.com/citation-file-format/cff-converter-python
-      rev: '44e8fc9'
-      hooks:
-          - id: validate-cff
-    - repo: https://github.com/fsfe/reuse-tool
-      rev: 'v1.1.2'
-      hooks:
-        - id: reuse
+  - repo: local
+    hooks:
+      # NOTE: copy from .pre-commit-hooks.yaml, for technical reasons
+      - id: somesy-sync
+        name: Run somesy sync
+        entry: somesy sync
+        language: python
+        files: '^\.somesy\.toml|pyproject\.toml$'
+        pass_filenames: false
 
-    - repo: local
-      hooks:
-        # NOTE: copy from .pre-commit-hooks.yaml, for technical reasons
-        - id: somesy-sync
-          name: Run somesy sync
-          entry: somesy sync
-          language: python
-          files: '^\.somesy\.toml|pyproject\.toml$'
-          pass_filenames: false
-
-        - id: somesy-fill
-          name: Update AUTHORS.md
-          entry: somesy fill -t docs/_template_authors.md -o AUTHORS.md
-          language: python
-          files: '^\.somesy\.toml|pyproject\.toml$'
-          pass_filenames: false
+      - id: somesy-fill
+        name: Update AUTHORS.md
+        entry: somesy fill -t docs/_template_authors.md -o AUTHORS.md
+        language: python
+        files: '^\.somesy\.toml|pyproject\.toml$'
+        pass_filenames: false

.somesy.toml

@@ -76,4 +76,4 @@ codemeta_file = "codemeta.json"
 no_sync_package_json = true
 show_info = false
 verbose = false
-debug = false
+debug = true

CHANGELOG.md

@@ -4,10 +4,16 @@ Here we provide notes that summarize the most important changes in each released
 
 Please consult the changelog to inform yourself about breaking changes and security issues.
 
+## [v0.2.1](https://github.com/Materials-Data-Science-and-Informatics/somesy/tree/v0.2.1) <small>(2023-11-29)</small> { id="0.2.1" }
+
+* **internal:** updated linters and dependencies
+* **internal:** pin codemetapy version to 2.5.2 to avoid breaking changes
+* fix bug caused by missing `config` section
+
 ## [v0.2.0](https://github.com/Materials-Data-Science-and-Informatics/somesy/tree/v0.2.0) <small>(2023-11-29)</small> { id="0.2.0" }
 
-* Test refactoring
-* Pydantic 2 implementation
+* **internal:** Test refactoring
+* **internal:** Pydantic 2 implementation
 * Added `publication_author` field to Person model
 
 ## [v0.1.0](https://github.com/Materials-Data-Science-and-Informatics/somesy/tree/v0.1.0) <small>(2023-08-10)</small> { id="0.1.0" }

codemeta.json

@@ -75,7 +75,7 @@
             "identifier": "codemetapy",
             "name": "codemetapy",
             "runtimePlatform": "Python 3",
-            "version": "^2.5.1"
+            "version": "2.5.2"
         },
         {
             "@type": "SoftwareApplication",