Product home: https://github.com/LordKay-sudo/gapforge
| Repository | Role |
|---|---|
| gapforge | Graph + GapForge API/UI + Flurizan case study |
| bioinsight-graph | Upstream disease–target graph platform (shared lineage) |
| kg-rag-demo | Citation-grounded literature / ClinicalTrials RAG + PeerLens filter |
| embabel-mcp | MCP tools + research_program_gaps agent |
| peerlens | Paper quality signals (retraction / concern gate) |
OSS/
gapforge/ # clone this first
bioinsight-graph/ # optional sibling
kg-rag-demo/
embabel-mcp/
peerlens/
| Service | Port |
|---|---|
| GapForge web | 8080 |
| GapForge API | 8000 |
| Neo4j | 7474 / 7687 |
| kg-rag web / API | 8081 / 8001 |
| kg-rag Neo4j | 7475 / 7688 |
| embabel-mcp SSE | 1337 |
See GAPFORGE.md and HUMAN_IN_THE_LOOP.md.