Dear scMEGA team,
Thank you for developing this useful package.
I am working with Arabidopsis datasets - GSE173834 for the scATAC data and my own scRNA-seq data. When I integrated them, at the step of SelectTFs I got this error
Creating Trajectory Group Matrix..
Error in base::rowMeans(x, na.rm = na.rm, dims = dims, ...) :
'x' must be an array of at least two dimensions
When I try to debug, it looks like, under GetTrajectory, Matrix::rowMeans fails. However, the cell_names has multiple cell names, so this should not be a vector. I will be grateful if you could help me on that. Please let me know what details you need, I will share.
Regards,
Rahul
Dear scMEGA team,
Thank you for developing this useful package.
I am working with Arabidopsis datasets - GSE173834 for the scATAC data and my own scRNA-seq data. When I integrated them, at the step of SelectTFs I got this error
Creating Trajectory Group Matrix..
Error in base::rowMeans(x, na.rm = na.rm, dims = dims, ...) :
'x' must be an array of at least two dimensions
When I try to debug, it looks like, under GetTrajectory, Matrix::rowMeans fails. However, the cell_names has multiple cell names, so this should not be a vector. I will be grateful if you could help me on that. Please let me know what details you need, I will share.
Regards,
Rahul